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STRINGSTRING
101265496 protein (Solanum lycopersicum) - STRING interaction network
"101265496" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101265496Uncharacterized protein; Pentatricopeptide repeat (PPR) superfamily protein (585 aa)    
Predicted Functional Partners:
Solyc03g080010.2.1
DNA mismatch repair protein MutS, type 2 (826 aa)
     
        0.873
Solyc06g019200.2.1
Uncharacterized protein; Ethylene-dependent gravitropism-deficient and yellow-green-like 2 (468 aa)
     
        0.848
101267149
Unknown protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biological_process unknown; LOCATED IN- chloroplast; EXPRESSED IN- 23 plant structures; EXPRESSED DURING- 13 growth stages; Has 144 Blast hits to 142 proteins in 73 species- Arc /.../3; Bacteria - 62; Metazoa - 7; Fungi - 13; Plants - 44; Viruses - 0; Other Eukaryotes - 15 (source- NCBI BLink) (311 aa)
     
        0.794
101258337
Uncharacterized protein; RAP (691 aa)
     
        0.607
Solyc10g045310.1.1
Protein of unknown function (DUF3531) (229 aa)
     
        0.542
Solyc01g080840.2.1
Protein translocase subunit SecA; Albino or Glassy Yellow 1; Belongs to the SecA family (1018 aa)
     
        0.437
Solyc00g090130.1.1
annotation not available (354 aa)
     
        0.437
101259632
annotation not available (488 aa)
     
        0.435
Solyc05g013150.2.1
annotation not available (466 aa)
     
        0.435
101245567
Uncharacterized protein; Tetratricopeptide repeat (TPR)-like superfamily protein (839 aa)
     
     
0.408
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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