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STRINGSTRING
Solyc02g088690.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc02g088690.2.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc02g088690.2.1annotation not available (316 aa)    
Predicted Functional Partners:
101261294
Auxin transport protein (BIG) (5104 aa)
           
  0.797
Solyc08g065980.2.1
annotation not available (1453 aa)
           
  0.739
104645850
annotation not available (362 aa)
           
  0.739
BAC19.3
BAC19.3 (425 aa)
           
  0.731
101263093
Uncharacterized protein; Pumilio 5 (995 aa)
           
  0.730
101264604
annotation not available (514 aa)
           
  0.711
101247969
Uncharacterized protein; UTP-galactose-1-phosphate uridylyltransferases;ribose-5-phosphate adenylyltransferases (342 aa)
       
 
  0.623
101260589
annotation not available (353 aa)
           
  0.573
101266709
annotation not available (363 aa)
   
 
  0.544
101255354
annotation not available (361 aa)
   
 
  0.544
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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