STRINGSTRING
TCP5 protein (Solanum lycopersicum) - STRING interaction network
"TCP5" - TCP transcription factor 5 in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TCP5TCP transcription factor 5 (284 aa)    
Predicted Functional Partners:
TCP17
TCP transcription factor 17 (416 aa)
       
 
  0.480
Solyc10g080080.1.1
Thioredoxin reductase (543 aa)
       
      0.454
Solyc04g016010.2.1
Uncharacterized protein (537 aa)
       
      0.454
TCP16
TCP transcription factor 16 (409 aa)
       
 
  0.418
TCP11
TCP transcription factor 11 (445 aa)
       
 
  0.418
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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