STRINGSTRING
Solyc02g089340.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc02g089340.2.1" - DNA-directed RNA polymerase in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc02g089340.2.1DNA-directed RNA polymerase ; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (711 aa)    
Predicted Functional Partners:
Solyc02g084730.2.1
rRNA adenine N(6)-methyltransferase (386 aa)
     
  0.697
Solyc01g100430.2.1
rRNA adenine N(6)-methyltransferase (354 aa)
     
  0.697
Solyc01g091800.2.1
rRNA adenine N(6)-methyltransferase (365 aa)
     
  0.697
Solyc02g078640.2.1
Uncharacterized protein (2023 aa)
       
      0.611
Solyc12g035870.1.1
Uncharacterized protein (398 aa)
     
   
  0.584
Solyc02g044050.1.1
Uncharacterized protein (491 aa)
     
   
  0.540
Solyc12g037940.1.1
Uncharacterized protein (136 aa)
     
   
  0.540
Solyc12g035950.1.1
Uncharacterized protein (51 aa)
     
   
  0.540
Solyc12g035940.1.1
Uncharacterized protein (54 aa)
     
   
  0.540
Solyc12g035930.1.1
Uncharacterized protein (169 aa)
     
   
  0.540
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
Server load: low (6%) [HD]