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101261676 protein (Solanum lycopersicum) - STRING interaction network
"101261676" - LIM domain-containing protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101261676LIM domain-containing protein (515 aa)    
Predicted Functional Partners:
Solyc04g016200.1.1
Glycosyltransferase; Putative glucosyltransferase ; Belongs to the UDP-glycosyltransferase family (451 aa)
           
  0.798
101255133
SecY protein transport family protein; Belongs to the SecY/SEC61-alpha family (576 aa)
           
  0.797
Solyc02g091330.2.1
AAR2 protein family (286 aa)
           
  0.763
101264734
Subtilase family protein (776 aa)
           
  0.738
101249160
Subtilase family protein (782 aa)
           
  0.738
Solyc01g091920.2.1
Subtilase family protein; Belongs to the peptidase S8 family (758 aa)
           
  0.730
Solyc02g082220.2.1
Sec23/Sec24 protein transport family protein (1030 aa)
     
   
  0.693
Solyc10g009330.2.1
annotation not available (207 aa)
     
 
  0.681
Solyc01g096180.2.1
annotation not available (245 aa)
     
 
  0.681
101265931
annotation not available (583 aa)
     
   
  0.679
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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