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Solyc02g090370.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc02g090370.2.1" - Reticulan like protein B13 in Solanum lycopersicum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc02g090370.2.1Reticulan like protein B13 (187 aa)    
Predicted Functional Partners:
101252688
Unknown protein; BEST Arabidopsis thaliana protein match is- unknown protein (TAIR-AT5G52420.1); Has 86 Blast hits to 86 proteins in 15 species- Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 84; Viruses - 0; Other Eukaryotes - 2 (source /.../ BLink) (264 aa)
     
   
  0.787
101264233
Hydroxyproline-rich glycoprotein family protein (416 aa)
       
      0.751
LOC543831
GTP cyclohydrolase 1; GTP cyclohydrolase 1 is the first enzyme in the biosynthetic pathway leading to folic acid (456 aa)
       
      0.751
Solyc07g044880.2.1
annotation not available (142 aa)
           
  0.694
101253164
Protein ROOT HAIR DEFECTIVE 3 homolog; Probable GTP-binding protein that may be involved in cell development (786 aa)
       
 
  0.688
101266805
Protein ROOT HAIR DEFECTIVE 3 homolog; Probable GTP-binding protein that may be involved in cell development (815 aa)
       
 
  0.688
104645830
annotation not available (276 aa)
     
   
  0.680
SNF4
SNF4 (373 aa)
     
   
  0.631
101265270
annotation not available (435 aa)
     
   
  0.622
101245571
Oleosin family protein (140 aa)
     
   
  0.613
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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