STRINGSTRING
Solyc02g090560.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc02g090560.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc02g090560.2.1Uncharacterized protein (877 aa)    
Predicted Functional Partners:
Solyc04g006930.2.1
Uncharacterized protein (800 aa)
     
 
  0.718
Solyc12g055920.1.1
Uncharacterized protein (226 aa)
       
 
  0.590
Solyc12g015870.1.1
Uncharacterized protein (224 aa)
       
 
  0.590
CBL1
Calcineurin B-like molecule (213 aa)
       
 
  0.590
CBL10
Calcineurin B-like 10; Calcineurin B-like molecule (257 aa)
       
 
  0.590
Solyc08g054570.1.1
Uncharacterized protein (186 aa)
       
 
  0.590
Solyc08g036590.1.1
Uncharacterized protein (229 aa)
       
 
  0.590
Solyc08g007160.2.1
Uncharacterized protein (215 aa)
       
 
  0.590
CBL2
Calcineurin B-like molecule (219 aa)
       
 
  0.590
Solyc07g005900.2.1
Uncharacterized protein (175 aa)
       
 
  0.590
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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