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STRINGSTRING
101250861 protein (Solanum lycopersicum) - STRING interaction network
"101250861" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101250861annotation not available (222 aa)    
Predicted Functional Partners:
101257115
BEST Arabidopsis thaliana protein match is- hydroxyproline-rich glycoprotein family protein (TAIR-AT3G56590.2); Has 78 Blast hits to 78 proteins in 11 species- Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 78; Viruses - 0; Other Eukaryo /.../0 (source- NCBI BLink) (468 aa)
           
  0.673
101245546
Uncharacterized protein; Basic helix-loop-helix (bHLH) DNA-binding superfamily protein (482 aa)
           
  0.563
Solyc03g045030.1.1
annotation not available (183 aa)
           
  0.465
TCP7
TCP transcription factor 7 (241 aa)
           
  0.465
THM16
Uncharacterized protein; Myb-related transcription factor (309 aa)
           
  0.444
101268562
annotation not available (296 aa)
           
  0.444
101252011
Beta-adaptin-like protein; Subunit of clathrin-associated adaptor protein complex that plays a role in protein sorting in the late-Golgi/trans-Golgi network (TGN) and/or endosomes. The AP complexes mediate both the recruitment of clathrin to membranes and the recognition of sorting signals within the cytosolic tails of transmembrane cargo molecules (896 aa)
           
  0.431
101263872
annotation not available (260 aa)
           
  0.429
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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