Solyc02g091010.1.1 protein (Solanum lycopersicum)

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Predicted Interactions

gene neighborhood

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Your Input:			Neighborhood	Gene Fusion	Cooccurence	Coexpression	Experiments	Databases	Textmining	[Homology]	Score
	Solyc02g091010.1.1	annotation not available (134 aa)
Predicted Functional Partners:
	101253565	Unknown protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biological_process unknown; LOCATED IN- nucleolus; EXPRESSED IN- 20 plant structures; EXPRESSED DURING- 13 growth stages; Has 2922 Blast hits to 2454 proteins in 263 species- Ar /.../ 0; Bacteria - 57; Metazoa - 1043; Fungi - 654; Plants - 388; Viruses - 11; Other Eukaryotes - 769 (source- NCBI BLink) (388 aa)									0.930
	101246938	Uncharacterized protein; Nucleoporin 155 (1481 aa)									0.925
	Solyc12g049410.1.1	Uncharacterized protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- transport; LOCATED IN- nuclear pore; EXPRESSED IN- 23 plant structures; EXPRESSED DURING- 13 growth stages; CONTAINS InterPro DOMAIN/s- Nuclear pore protein 84/107 (InterPro-IPR007252); Has 5399 /.../ hits to 5001 proteins in 612 species- Archae - 19; Bacteria - 730; Metazoa - 2186; Fungi - 823; Plants - 382; Viruses - 37; Other Eukaryotes - 1222 (source- NCBI BLink) (1016 aa)									0.925
	101262406	annotation not available (862 aa)									0.920
	101264859	Uncharacterized protein; Structural constituent of nuclear pore (758 aa)									0.909
	101247869	annotation not available (350 aa)									0.909
	101253512	Uncharacterized protein; CONTAINS InterPro DOMAIN/s- Nuclear pore complex protein, Nucleoporin Nup85-like (InterPro-IPR011502); Has 30201 Blast hits to 17322 proteins in 780 species- Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Ot /.../karyotes - 2996 (source- NCBI BLink) (719 aa)									0.865
	GATC	Glutamyl-tRNA(Gln) amidotransferase subunit C, chloroplastic/mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in chloroplasts and mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho- Glu-tRNA(Gln); Belongs to the GatC family (140 aa)									0.865
	101257847	annotation not available (301 aa)									0.860
	101265789	annotation not available (302 aa)									0.860

Your Current Organism:

Solanum lycopersicum

NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
101246938	101247869	Solyc07g008160.2.1	Solyc10g047000.1.1	Uncharacterized protein; Nucleoporin 155	annotation not available	0.819
101246938	101253512	Solyc07g008160.2.1	Solyc08g066580.2.1	Uncharacterized protein; Nucleoporin 155	Uncharacterized protein; CONTAINS InterPro DOMAIN/s- Nuclear pore complex protein, Nucleoporin Nup85-like (InterPro-IPR011502); Has 30201 Blast hits to 17322 proteins in 780 species- Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Ot /.../karyotes - 2996 (source- NCBI BLink)	0.958
101246938	101253565	Solyc07g008160.2.1	Solyc12g035650.1.1	Uncharacterized protein; Nucleoporin 155	Unknown protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biological_process unknown; LOCATED IN- nucleolus; EXPRESSED IN- 20 plant structures; EXPRESSED DURING- 13 growth stages; Has 2922 Blast hits to 2454 proteins in 263 species- Ar /.../ 0; Bacteria - 57; Metazoa - 1043; Fungi - 654; Plants - 388; Viruses - 11; Other Eukaryotes - 769 (source- NCBI BLink)	0.981
101246938	101257847	Solyc07g008160.2.1	Solyc03g120900.1.1	Uncharacterized protein; Nucleoporin 155	annotation not available	0.952
101246938	101262406	Solyc07g008160.2.1	Solyc04g016240.2.1	Uncharacterized protein; Nucleoporin 155	annotation not available	0.997
101246938	101264859	Solyc07g008160.2.1	Solyc01g090670.2.1	Uncharacterized protein; Nucleoporin 155	Uncharacterized protein; Structural constituent of nuclear pore	0.974
101246938	101265789	Solyc07g008160.2.1	Solyc02g087300.1.1	Uncharacterized protein; Nucleoporin 155	annotation not available	0.952
101246938	GATC	Solyc07g008160.2.1	Solyc07g063140.1.1	Uncharacterized protein; Nucleoporin 155	Glutamyl-tRNA(Gln) amidotransferase subunit C, chloroplastic/mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in chloroplasts and mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho- Glu-tRNA(Gln); Belongs to the GatC family	0.958
101246938	Solyc02g091010.1.1	Solyc07g008160.2.1	Solyc02g091010.1.1	Uncharacterized protein; Nucleoporin 155	annotation not available	0.925
101246938	Solyc12g049410.1.1	Solyc07g008160.2.1	Solyc12g049410.1.1	Uncharacterized protein; Nucleoporin 155	Uncharacterized protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- transport; LOCATED IN- nuclear pore; EXPRESSED IN- 23 plant structures; EXPRESSED DURING- 13 growth stages; CONTAINS InterPro DOMAIN/s- Nuclear pore protein 84/107 (InterPro-IPR007252); Has 5399 /.../ hits to 5001 proteins in 612 species- Archae - 19; Bacteria - 730; Metazoa - 2186; Fungi - 823; Plants - 382; Viruses - 37; Other Eukaryotes - 1222 (source- NCBI BLink)	0.997
101247869	101246938	Solyc10g047000.1.1	Solyc07g008160.2.1	annotation not available	Uncharacterized protein; Nucleoporin 155	0.819
101247869	101253512	Solyc10g047000.1.1	Solyc08g066580.2.1	annotation not available	Uncharacterized protein; CONTAINS InterPro DOMAIN/s- Nuclear pore complex protein, Nucleoporin Nup85-like (InterPro-IPR011502); Has 30201 Blast hits to 17322 proteins in 780 species- Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Ot /.../karyotes - 2996 (source- NCBI BLink)	0.746
101247869	101253565	Solyc10g047000.1.1	Solyc12g035650.1.1	annotation not available	Unknown protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biological_process unknown; LOCATED IN- nucleolus; EXPRESSED IN- 20 plant structures; EXPRESSED DURING- 13 growth stages; Has 2922 Blast hits to 2454 proteins in 263 species- Ar /.../ 0; Bacteria - 57; Metazoa - 1043; Fungi - 654; Plants - 388; Viruses - 11; Other Eukaryotes - 769 (source- NCBI BLink)	0.987
101247869	101257847	Solyc10g047000.1.1	Solyc03g120900.1.1	annotation not available	annotation not available	0.829
101247869	101262406	Solyc10g047000.1.1	Solyc04g016240.2.1	annotation not available	annotation not available	0.974
101247869	101264859	Solyc10g047000.1.1	Solyc01g090670.2.1	annotation not available	Uncharacterized protein; Structural constituent of nuclear pore	0.973
101247869	101265789	Solyc10g047000.1.1	Solyc02g087300.1.1	annotation not available	annotation not available	0.829
101247869	GATC	Solyc10g047000.1.1	Solyc07g063140.1.1	annotation not available	Glutamyl-tRNA(Gln) amidotransferase subunit C, chloroplastic/mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in chloroplasts and mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho- Glu-tRNA(Gln); Belongs to the GatC family	0.746
101247869	Solyc02g091010.1.1	Solyc10g047000.1.1	Solyc02g091010.1.1	annotation not available	annotation not available	0.909
101247869	Solyc12g049410.1.1	Solyc10g047000.1.1	Solyc12g049410.1.1	annotation not available	Uncharacterized protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- transport; LOCATED IN- nuclear pore; EXPRESSED IN- 23 plant structures; EXPRESSED DURING- 13 growth stages; CONTAINS InterPro DOMAIN/s- Nuclear pore protein 84/107 (InterPro-IPR007252); Has 5399 /.../ hits to 5001 proteins in 612 species- Archae - 19; Bacteria - 730; Metazoa - 2186; Fungi - 823; Plants - 382; Viruses - 37; Other Eukaryotes - 1222 (source- NCBI BLink)	0.838

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