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Solyc02g091120.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc02g091120.2.1" - DNA LIGASE 6 in Solanum lycopersicum
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc02g091120.2.1DNA LIGASE 6 (1473 aa)    
Predicted Functional Partners:
pcna
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (264 aa)
   
 
  0.996
FEN1
Flap endonuclease 1; Structure-specific nuclease with 5’-flap endonuclease and 5’-3’ exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5’-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5’-end of a downstream Okazaki fragment. It enters the flap from the 5’-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site-terminated flap. Acts as a [...] (382 aa)
   
 
  0.996
101248457
Uncharacterized protein; Single-stranded DNA endonuclease family protein (600 aa)
   
 
  0.993
101264254
5’-3’ exonuclease family protein (603 aa)
   
 
  0.993
101267455
Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism (527 aa)
   
   
  0.988
MSH2
Uncharacterized protein; Component of the post-replicative DNA mismatch repair system (MMR) (943 aa)
     
 
  0.983
101245831
5’-3’ exonuclease family protein (544 aa)
   
 
  0.982
Solyc02g071530.1.1
5’-3’ exonuclease family protein (742 aa)
   
 
  0.982
101264663
DNA repair and meiosis protein (Mre11); Belongs to the MRE11/RAD32 family (731 aa)
   
 
  0.977
101055576
DNA polymerase alpha catalytic subunit (1561 aa)
     
 
  0.975
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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