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XTH7 protein (Solanum lycopersicum) - STRING interaction network
"XTH7" - Xyloglucan endotransglucosylase/hydrolase in Solanum lycopersicum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XTH7Xyloglucan endotransglucosylase/hydrolase; Catalyzes xyloglucan endohydrolysis (XEH) and/or endotransglycosylation (XET). Cleaves and religates xyloglucan polymers, an essential constituent of the primary cell wall, and thereby participates in cell wall construction of growing tissues; Belongs to the glycosyl hydrolase 16 family (295 aa)    
Predicted Functional Partners:
101262681
annotation not available (222 aa)
           
  0.775
101249100
annotation not available (417 aa)
           
  0.773
101266558
Uncharacterized protein; Pumilio 24 (620 aa)
           
  0.773
101256724
Hexosyltransferase; Galacturonosyltransferase 3; Belongs to the glycosyltransferase 8 family (677 aa)
           
  0.772
Solyc07g005680.2.1
annotation not available (465 aa)
           
  0.685
Solyc02g080660.2.1
O-Glycosyl hydrolases family 17 protein; Belongs to the glycosyl hydrolase 17 family (413 aa)
           
  0.680
101253506
Uncharacterized protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biological_process unknown; LOCATED IN- chloroplast, vacuole; EXPRESSED IN- 19 plant structures; EXPRESSED DURING- 11 growth stages; CONTAINS InterPro DOMAIN/s- Lytic transglycosylase-like, cata /.../(InterPro-IPR008258); Has 171 Blast hits to 155 proteins in 40 species- Archae - 0; Bacteria - 54; Metazoa - 0; Fungi - 0; Plants - 55; Viruses - 0; Other Eukaryotes - 62 (source- NCBI BLink) (422 aa)
           
  0.614
Solyc10g008870.2.1
Transcription elongation factor 1 homolog; Transcription elongation factor implicated in the maintenance of proper chromatin structure in actively transcribed regions (77 aa)
           
  0.611
Solyc02g077440.2.1
Transcription elongation factor 1 homolog; Transcription elongation factor implicated in the maintenance of proper chromatin structure in actively transcribed regions (74 aa)
           
  0.611
101253585
annotation not available (206 aa)
           
  0.581
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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