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STRINGSTRING
Solyc02g092320.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc02g092320.2.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc02g092320.2.1annotation not available (271 aa)    
Predicted Functional Partners:
101257209
Unknown protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biological_process unknown; LOCATED IN- chloroplast; EXPRESSED IN- 22 plant structures; EXPRESSED DURING- 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species /.../ae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source- NCBI BLink) (393 aa)
           
  0.680
101260172
Uncharacterized protein; Homolog of bacterial PANC (314 aa)
           
  0.648
101250248
Uncharacterized protein; P-loop containing nucleoside triphosphate hydrolases superfamily protein (297 aa)
     
   
  0.630
Solyc04g079790.2.1
Ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family (237 aa)
     
   
  0.605
NOS1
Uncharacterized protein; Nitric oxide synthase (560 aa)
     
   
  0.605
101268893
Uncharacterized protein; RNApolymerase sigma-subunit C (551 aa)
     
 
  0.581
101261082
Uncharacterized protein; Formyltransferase, putative (360 aa)
     
 
  0.571
101264317
Unknown protein; Has 48 Blast hits to 48 proteins in 21 species- Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 8 (source- NCBI BLink); Belongs to the complex I LYR family (91 aa)
           
  0.570
101262600
Uncharacterized protein; Plastid transcriptionally active7 (167 aa)
           
  0.565
Solyc02g079730.2.1
Uncharacterized protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biological_process unknown; LOCATED IN- chloroplast; EXPRESSED IN- 21 plant structures; EXPRESSED DURING- 10 growth stages; BEST Arabidopsis thaliana protein match is- Thioredoxin superfamily pr /.../(TAIR-AT2G31840.1); Has 114 Blast hits to 112 proteins in 39 species- Archae - 2; Bacteria - 0; Metazoa - 17; Fungi - 6; Plants - 67; Viruses - 0; Other Eukaryotes - 22 (source- NCBI BLink) (365 aa)
           
  0.560
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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