STRINGSTRING
Solyc02g092700.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc02g092700.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc02g092700.2.1Uncharacterized protein (311 aa)    
Predicted Functional Partners:
Solyc09g008270.2.1
Uncharacterized protein (183 aa)
   
     
  0.628
Solyc08g007580.2.1
Uncharacterized protein (193 aa)
   
          0.514
Solyc08g079680.2.1
Uncharacterized protein (184 aa)
   
          0.509
Solyc01g111750.2.1
Uncharacterized protein (305 aa)
   
        0.506
Solyc07g066620.2.1
Uncharacterized protein (358 aa)
   
          0.506
Solyc01g008070.2.1
Uncharacterized protein (432 aa)
   
          0.492
Solyc08g081080.2.1
Uncharacterized protein (277 aa)
   
          0.485
Solyc11g071890.1.1
Uncharacterized protein (360 aa)
   
          0.480
Solyc03g034170.2.1
Uncharacterized protein (285 aa)
   
        0.464
Solyc01g097650.2.1
Uncharacterized protein (406 aa)
           
  0.457
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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