STRINGSTRING
NRAMP3 protein (Solanum lycopersicum) - STRING interaction network
"NRAMP3" - Metal transporter in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NRAMP3Metal transporter (509 aa)    
Predicted Functional Partners:
LOC543597
Iron-regulated transporter 1 (350 aa)
           
  0.929
CHLN
Nicotianamine synthase ; Synthesizes nicotianamine, a polyamine that serves as a sensor for the physiological iron status within the plant, and/or might be involved in the transport of iron (317 aa)
           
  0.929
FRO1
Ferric-chelate reductase (719 aa)
     
   
  0.917
LOC543598
Iron-regulated transporter 2 (352 aa)
           
  0.858
Solyc07g065380.2.1
Putative zinc transporter (350 aa)
           
  0.853
fer
BHLH transcriptional regulator (304 aa)
           
  0.699
AH
Basic helix-loop-helix transcription factor (680 aa)
           
  0.694
Solyc11g072880.1.1
Uncharacterized protein (1061 aa)
     
 
  0.620
Solyc07g022790.2.1
Uncharacterized protein (396 aa)
     
 
  0.620
Solyc07g022780.2.1
Uncharacterized protein (366 aa)
     
 
  0.620
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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