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STRINGSTRING
NRAMP3 protein (Solanum lycopersicum) - STRING interaction network
"NRAMP3" - Metal transporter in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NRAMP3Metal transporter (509 aa)    
Predicted Functional Partners:
101263898
Uncharacterized protein; Vacuolar iron transporter 1 (239 aa)
           
  0.831
FRO1
Uncharacterized protein; Ferric-chelate reductase (719 aa)
     
   
  0.819
LOC543597
Iron-regulated transporter 1 (350 aa)
           
  0.816
LOC543598
Iron-regulated transporter 2 (352 aa)
           
  0.810
CHLN
Nicotianamine synthase; Synthesizes nicotianamine, a polyamine that serves as a sensor for the physiological iron status within the plant, and/or might be involved in the transport of iron (317 aa)
     
   
  0.797
cdc5
CDC5-like protein (987 aa)
       
      0.745
101245696
MATE efflux family protein; Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family (525 aa)
           
  0.734
fer
BHLH transcriptional regulator (304 aa)
           
  0.733
101265663
Uncharacterized protein; YELLOW STRIPE like 1 (663 aa)
           
  0.730
LOC778298
Metallothionein-like protein type 2 B; Metallothioneins have a high content of cysteine residues that bind various heavy metals (82 aa)
           
  0.720
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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