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STRINGSTRING
Solyc02g092930.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc02g092930.1.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc02g092930.1.1annotation not available (361 aa)    
Predicted Functional Partners:
100736509
Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5’-TGTCTC-3’ found in the auxin-responsive promoter elements (AuxREs) (654 aa)
       
 
  0.778
MPK3
Mitogen-activated protein kinase 3 (373 aa)
     
 
  0.605
101259192
HXXXD-type acyl-transferase family protein (465 aa)
           
  0.598
ARF19
Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5’-TGTCTC-3’ found in the auxin-responsive promoter elements (AuxREs) (1112 aa)
       
 
  0.583
ARF19-1
Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5’-TGTCTC-3’ found in the auxin-responsive promoter elements (AuxREs) (1097 aa)
       
 
  0.583
101244425
RING/U-box superfamily protein (276 aa)
       
 
  0.577
101246578
U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA (229 aa)
     
      0.538
101245298
annotation not available (147 aa)
       
 
  0.529
101263097
Kinesin-like protein; ATP binding microtubule motor family protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family (962 aa)
     
 
  0.497
101246632
annotation not available (1005 aa)
     
 
  0.483
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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