STRINGSTRING
cycD3 protein (Solanum lycopersicum) - STRING interaction network
"cycD3" - CycD3 in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cycD3CycD3;1 protein; Cyclin D3.1 (359 aa)    
Predicted Functional Partners:
cdc2A-1
Cyclin-dependent protein kinase p34cdc2 (294 aa)
       
  0.994
Solyc07g009140.2.1
Uncharacterized protein (386 aa)
       
    0.972
Solyc11g070140.1.1
Uncharacterized protein (294 aa)
       
  0.968
Solyc06g082580.2.1
Uncharacterized protein (303 aa)
       
      0.946
RBR1
Retinoblastoma-related protein 1 (1018 aa)
     
  0.940
Solyc02g086450.1.1
Uncharacterized protein (105 aa)
       
      0.916
Solyc02g067810.1.1
EXG1 (104 aa)
       
      0.916
cdkB1
B1-type cyclin dependent kinase (303 aa)
       
  0.906
Solyc08g041890.2.1
Importin subunit alpha (577 aa)
       
      0.901
Solyc01g060470.2.1
Importin subunit alpha (530 aa)
       
      0.901
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
Server load: low (24%) [HD]