STRINGSTRING
Solyc02g093440.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc02g093440.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc02g093440.2.1Uncharacterized protein (353 aa)    
Predicted Functional Partners:
Solyc04g058070.2.1
Uncharacterized protein (617 aa)
         
  0.937
Solyc12g098120.1.1
Uncharacterized protein (289 aa)
         
    0.900
MIOX
Myo-inositol oxygenase (317 aa)
         
    0.900
Solyc11g006570.1.1
Uncharacterized protein (251 aa)
         
    0.900
Solyc10g005400.2.1
Uncharacterized protein (350 aa)
         
    0.900
Solyc06g062430.2.1
Uncharacterized protein (305 aa)
         
    0.900
Solyc03g078810.2.1
Uncharacterized protein (457 aa)
         
    0.900
Solyc07g016170.2.1
Uncharacterized protein (980 aa)
         
  0.813
Solyc00g011890.2.1
Annotation not available (1036 aa)
         
  0.813
TAPG4
Polygalacturonase 4 (387 aa)
         
    0.800
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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