STRINGSTRING
Solyc02g093490.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc02g093490.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc02g093490.2.1Uncharacterized protein (268 aa)    
Predicted Functional Partners:
Solyc10g045400.1.1
Uncharacterized protein (404 aa)
     
  0.983
TRRAP
Transformation/transcription domain-associated protein (3913 aa)
       
  0.976
Solyc04g010090.2.1
Uncharacterized protein (161 aa)
     
  0.975
Solyc06g065700.2.1
Uncharacterized protein (685 aa)
     
  0.975
Solyc07g047610.2.1
Uncharacterized protein (560 aa)
       
  0.975
Solyc05g054200.2.1
Uncharacterized protein (543 aa)
       
  0.975
Solyc08g068810.2.1
Uncharacterized protein (549 aa)
     
  0.970
Solyc08g061830.1.1
Uncharacterized protein (179 aa)
     
  0.970
Solyc07g007640.1.1
Uncharacterized protein (237 aa)
     
  0.970
Solyc09g009680.2.1
Uncharacterized protein (566 aa)
     
  0.963
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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