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STRINGSTRING
101254148 protein (Solanum lycopersicum) - STRING interaction network
"101254148" - ATP12 protein-related in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101254148ATP12 protein-related (339 aa)    
Predicted Functional Partners:
101247271
INVOLVED IN- protein complex assembly; LOCATED IN- mitochondrion, chloroplast; EXPRESSED IN- 19 plant structures; EXPRESSED DURING- 9 growth stages; CONTAINS InterPro DOMAIN/s- ATP11 (InterPro-IPR010591); Has 304 Blast hits to 304 proteins in 167 sp /.../ Archae - 0; Bacteria - 0; Metazoa - 101; Fungi - 112; Plants - 39; Viruses - 0; Other Eukaryotes - 52 (source- NCBI BLink) (252 aa)
     
 
  0.966
101266363
annotation not available (229 aa)
     
   
  0.930
Solyc04g009140.2.1
annotation not available (226 aa)
     
   
  0.930
101252799
annotation not available (160 aa)
   
        0.880
101267247
annotation not available (203 aa)
   
        0.880
101266952
annotation not available (203 aa)
   
        0.880
Solyc00g042140.1.1
annotation not available (399 aa)
     
 
  0.833
Solyc10g038060.1.1
annotation not available (145 aa)
     
        0.822
101264655
annotation not available (211 aa)
     
        0.822
Solyc00g042130.1.1
annotation not available (704 aa)
     
 
  0.813
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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