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STRINGSTRING
SO protein (Solanum lycopersicum) - STRING interaction network
"SO" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SOUncharacterized protein; Sulfite oxidase (393 aa)    
Predicted Functional Partners:
sir
Sulfite reductase (691 aa)
   
 
  0.992
MST1
Sulfurtransferase (371 aa)
   
 
  0.989
101264887
Uncharacterized protein; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain (112 aa)
     
  0.980
Solyc01g103220.2.1
Cytochrome c; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain (112 aa)
     
  0.980
MST2
Thiosulfate-cyanide sulfurtransferase-like protein (318 aa)
   
 
  0.980
101252466
annotation not available (456 aa)
       
  0.979
101257319
annotation not available (456 aa)
       
  0.979
LOC544267
Adenylyl-sulfate reductase (461 aa)
       
  0.972
Solyc12g011430.1.1
annotation not available (284 aa)
     
 
  0.959
101254405
annotation not available (284 aa)
     
 
  0.959
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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