• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
101267463 protein (Solanum lycopersicum) - STRING interaction network
"101267463" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101267463Uncharacterized protein; DHBP synthase RibB-like alpha/beta domain (310 aa)    
Predicted Functional Partners:
101253662
Uncharacterized protein; S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (213 aa)
     
   
  0.950
101265463
Glycine cleavage T-protein family (401 aa)
         
  0.929
Solyc09g015460.1.1
annotation not available (100 aa)
   
   
  0.839
Solyc01g104060.2.1
annotation not available (412 aa)
   
   
  0.839
GCP1
Probable tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in mitochondrial tRNAs that read codons beginning with adenine. Probably involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37. Involved in mitochondrial genome maintenance (453 aa)
   
   
  0.798
GCP2
Probable tRNA N6-adenosine threonylcarbamoyltransferase; Component of the EKC/KEOPS complex that is required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. The complex is probably involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37. Likely plays a direct catalytic role in this reaction, but requires other protein(s) of the complex to fulfill this activity (346 aa)
   
   
  0.795
101263723
Uncharacterized protein; methionine--tRNA ligase, putative / methionyl-tRNA synthetase, putative / MetRS, putative; Belongs to the class-I aminoacyl-tRNA synthetase family (812 aa)
   
   
  0.759
Solyc05g055610.2.1
Met-10+ like family protein / kelch repeat-containing protein (994 aa)
   
   
  0.756
Solyc12g100070.1.1
Uncharacterized protein; S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (196 aa)
   
   
  0.727
101253854
Uncharacterized protein; tRNA synthetase class I (I, L, M and V) family protein; Belongs to the class-I aminoacyl-tRNA synthetase family (1182 aa)
   
   
  0.723
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
Server load: low (14%) [HD]