STRINGSTRING
Solyc02g094610.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc02g094610.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc02g094610.1.1Uncharacterized protein (292 aa)    
Predicted Functional Partners:
Y14
RNA-binding protein 8A (195 aa)
       
 
  0.816
Solyc03g093680.2.1
Mago nashi protein (151 aa)
       
      0.805
Solyc12g088680.1.1
Uncharacterized protein (160 aa)
       
 
  0.704
Solyc07g021660.1.1
Uncharacterized protein (138 aa)
       
 
  0.704
Solyc04g078620.2.1
Uncharacterized protein (160 aa)
       
 
  0.704
Solyc03g112720.2.1
Uncharacterized protein (149 aa)
       
 
  0.704
Solyc03g044260.2.1
Uncharacterized protein (160 aa)
       
 
  0.704
Solyc02g093110.2.1
Uncharacterized protein (160 aa)
       
 
  0.704
Solyc05g010160.2.1
Uncharacterized protein (1020 aa)
     
   
  0.528
TNPO1
Transportin-1 (890 aa)
     
   
  0.519
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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