STRINGSTRING
Solyc03g005410.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc03g005410.2.1" - Phosphatidate cytidylyltransferase in Solanum lycopersicum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc03g005410.2.1Phosphatidate cytidylyltransferase (426 aa)    
Predicted Functional Partners:
Solyc10g005290.2.1
Uncharacterized protein (357 aa)
   
 
  0.962
Solyc04g049550.2.1
Uncharacterized protein (307 aa)
   
 
  0.962
Solyc04g009580.2.1
Uncharacterized protein (309 aa)
   
 
  0.962
Solyc11g065890.1.1
Uncharacterized protein (377 aa)
   
 
  0.960
Solyc10g079110.1.1
Uncharacterized protein (382 aa)
   
 
  0.960
Solyc07g005580.2.1
1-acyl-sn-glycerol-3-phosphate acyltransferase (371 aa)
   
 
  0.960
Solyc04g079880.2.1
Uncharacterized protein (384 aa)
   
 
  0.960
Solyc03g063880.2.1
Uncharacterized protein (375 aa)
   
 
  0.960
Solyc01g109370.2.1
Uncharacterized protein (366 aa)
   
 
  0.960
Solyc08g005990.2.1
Uncharacterized protein (223 aa)
   
 
  0.959
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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