STRINGSTRING
Solyc03g005450.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc03g005450.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc03g005450.2.1Uncharacterized protein (740 aa)    
Predicted Functional Partners:
ETR6
Ethylene receptor (754 aa)
   
   
  0.485
Solyc01g087500.2.1
DNA topoisomerase 2 ; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1478 aa)
         
  0.473
Solyc07g005110.2.1
Uncharacterized protein (748 aa)
       
  0.456
Solyc10g007420.2.1
Uncharacterized protein (425 aa)
         
  0.455
Solyc10g007240.1.1
Uncharacterized protein (594 aa)
         
  0.455
Solyc10g007230.1.1
Uncharacterized protein (596 aa)
         
  0.455
Solyc12g098100.1.1
Uncharacterized protein (1097 aa)
     
  0.437
Solyc12g008500.1.1
Uncharacterized protein (1008 aa)
     
  0.437
Solyc12g008400.1.1
Uncharacterized protein (1204 aa)
     
  0.437
Solyc10g085120.1.1
Uncharacterized protein (1013 aa)
     
  0.437
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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