STRINGSTRING
Solyc03g005520.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc03g005520.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc03g005520.1.1Uncharacterized protein (211 aa)    
Predicted Functional Partners:
EIL4
EIN3-like protein (605 aa)
         
  0.890
EIL1
EIL1 (610 aa)
         
  0.890
EIL3
EIL3 (601 aa)
         
  0.890
EIL2
EIL2 (614 aa)
         
  0.890
Solyc04g054840.1.1
Uncharacterized protein (503 aa)
         
    0.800
Solyc03g096630.1.1
Uncharacterized protein (434 aa)
         
    0.800
Solyc00g154980.1.1
Annotation not available (296 aa)
         
    0.800
Solyc12g070100.1.1
Uncharacterized protein (805 aa)
       
      0.604
ETR1
Ethylene receptor 1 ; May act early in the ethylene signal transduction pathway, possibly as an ethylene receptor, or as a regulator of the pathway (754 aa)
           
  0.491
Never-ripe
Ethylene receptor; Ethylene receptor neverripe (635 aa)
           
  0.491
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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