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STRINGSTRING
101252749 protein (Solanum lycopersicum) - STRING interaction network
"101252749" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101252749annotation not available (860 aa)    
Predicted Functional Partners:
101243851
RING-type E3 ubiquitin transferase; Plant U-box 8 (371 aa)
       
 
  0.661
101256171
annotation not available (425 aa)
           
  0.552
101262582
Protein of unknown function (DUF3550/UPF0682) (594 aa)
           
  0.495
101265334
Protein serine/threonine phosphatases;protein kinases;catalytics;cAMP-dependent protein kinase regulators;ATP binding;protein serine/threonine phosphatases (1080 aa)
     
 
  0.489
Solyc04g082070.2.1
annotation not available (474 aa)
           
  0.465
101245319
RING-type E3 ubiquitin transferase; Plant U-box 17 (724 aa)
       
 
  0.431
101256642
Ribosomal protein L23/L15e family protein (188 aa)
           
  0.426
101259699
annotation not available (223 aa)
           
  0.426
101253732
Lysm domain GPI-anchored protein 2 precursor (345 aa)
           
  0.426
101266484
Uncharacterized protein; Zinc finger, RING-type;Transcription factor jumonji/aspartyl beta-hydroxylase (1005 aa)
           
  0.422
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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