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STRINGSTRING
Solyc03g006980.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc03g006980.2.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc03g006980.2.1annotation not available (486 aa)    
Predicted Functional Partners:
101249430
Uncharacterized protein; alpha-L-fucosidase 1 (518 aa)
   
   
 
0.805
101258193
Uncharacterized protein; L-fucokinase/GDP-L-fucose pyrophosphorylase (1065 aa)
           
  0.681
100529104
Beta-hexosaminidase 2 (552 aa)
 
   
  0.568
Solyc11g008810.1.1
Beta-hexosaminidase 3 (497 aa)
 
   
  0.565
101256611
Glycoside hydrolase family 2 protein; Belongs to the glycosyl hydrolase 2 family (1110 aa)
   
  0.558
100529103
Beta-hexosaminidase 1 (575 aa)
 
   
  0.550
101267848
annotation not available (969 aa)
 
     
  0.549
101266909
BNR/Asp-box repeat family protein (320 aa)
          0.541
Solyc04g047750.2.1
Uncharacterized protein; CONTAINS InterPro DOMAIN/s- Taxilin (InterPro-IPR019132); Has 30201 Blast hits to 17322 proteins in 780 species- Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source- NCBI BLink) (128 aa)
           
  0.517
Solyc06g062660.2.1
Beta-galactosidase 17 (709 aa)
 
     
  0.492
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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