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Solyc03g007270.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc03g007270.2.1" - Protein phosphatase 2C family protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc03g007270.2.1Protein phosphatase 2C family protein (298 aa)    
Predicted Functional Partners:
101247495
RING/U-box superfamily protein (313 aa)
           
  0.927
Solyc07g045380.2.1
Uncharacterized protein; Tetratricopeptide repeat (TPR)-like superfamily protein (568 aa)
     
 
  0.907
101248473
Uncharacterized protein; Chloroplast J-like domain 1 (294 aa)
       
 
  0.869
101255066
Uncharacterized protein; GroES-like zinc-binding alcohol dehydrogenase family protein (396 aa)
           
  0.851
101258291
Uncharacterized protein; Translocase of the inner mitochondrial membrane 13; Belongs to the small Tim family (88 aa)
           
  0.851
101258293
Uncharacterized protein; Shikimate kinase like 2 (386 aa)
           
  0.699
101245695
Protein of unknown function, DUF593 (1195 aa)
           
  0.648
Solyc01g097040.2.1
Protein of unknown function, DUF593 (911 aa)
           
  0.648
101246907
annotation not available (190 aa)
       
 
  0.619
Solyc08g065410.1.1
annotation not available (146 aa)
       
 
  0.619
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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