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Solyc03g007370.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc03g007370.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc03g007370.2.1Uncharacterized protein; Sigma factor E (515 aa)    
Predicted Functional Partners:
Solyc12g096260.1.1
annotation not available (128 aa)
       
 
  0.930
101253508
annotation not available (169 aa)
       
 
  0.930
101246606
Uncharacterized protein; P-loop containing nucleoside triphosphate hydrolases superfamily protein (987 aa)
     
        0.869
LOC544162
Zeaxanthin epoxidase, chloroplastic; Converts zeaxanthin into antheraxanthin and subsequently violaxanthin. Involved in the epoxidation of zeaxanthin. Plays an important role in resistance to stresses, seed development and dormancy (669 aa)
     
   
  0.867
101252103
Glutaredoxin family protein (393 aa)
     
        0.865
101257426
Senescence-associated family protein (428 aa)
     
        0.864
101257407
Protein kinase superfamily protein (785 aa)
     
        0.863
Solyc03g113990.2.1
Uncharacterized protein; Putative thiol-disulphide oxidoreductase DCC (215 aa)
   
        0.859
101259186
annotation not available (144 aa)
   
 
  0.852
101256375
annotation not available (695 aa)
     
 
  0.848
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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