STRINGSTRING
CRNKL1 protein (Solanum lycopersicum) - STRING interaction network
"CRNKL1" - Crooked neck-like protein 1 in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CRNKL1Crooked neck-like protein 1 (664 aa)    
Predicted Functional Partners:
Solyc01g086990.2.1
Uncharacterized protein (916 aa)
     
0.995
Solyc10g055640.1.1
Uncharacterized protein (310 aa)
     
  0.994
Solyc07g052200.1.1
Uncharacterized protein (196 aa)
     
  0.994
cdc5
CDC5-like protein (987 aa)
     
  0.986
Solyc12g040310.1.1
Uncharacterized protein (66 aa)
     
  0.984
Solyc03g044040.1.1
Uncharacterized protein (190 aa)
     
  0.984
Solyc03g044030.1.1
Uncharacterized protein (361 aa)
     
  0.984
Solyc05g051070.2.1
Uncharacterized protein (310 aa)
     
  0.982
Solyc09g090660.2.1
Uncharacterized protein (521 aa)
     
  0.981
Solyc02g078970.2.1
Uncharacterized protein (570 aa)
     
  0.980
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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