STRINGSTRING
Solyc03g007860.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc03g007860.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc03g007860.1.1Uncharacterized protein (185 aa)    
Predicted Functional Partners:
Solyc02g005200.2.1
Uncharacterized protein (365 aa)
   
        0.508
Solyc01g097820.2.1
Uncharacterized protein (250 aa)
   
          0.503
Solyc03g006540.2.1
Uncharacterized protein (180 aa)
   
        0.494
Solyc08g083360.2.1
Uncharacterized protein (192 aa)
   
        0.493
Solyc10g084040.1.1
Uncharacterized protein (219 aa)
   
        0.489
Solyc06g066620.2.1
Uncharacterized protein (147 aa)
   
        0.473
Solyc03g116870.2.1
Uncharacterized protein (463 aa)
   
        0.462
Solyc02g086050.2.1
Uncharacterized protein (250 aa)
   
          0.458
Solyc02g063170.2.1
Uncharacterized protein (246 aa)
   
          0.443
Solyc06g082940.2.1
Uncharacterized protein (220 aa)
   
          0.437
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
Server load: low (9%) [HD]