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Solyc03g007910.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc03g007910.1.1" - Protein kinase superfamily protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc03g007910.1.1Protein kinase superfamily protein (385 aa)    
Predicted Functional Partners:
101262978
Uncharacterized protein; ATP-dependent RNA helicase, mitochondrial, putative (764 aa)
       
 
  0.852
101254419
Uncharacterized protein; GPI transamidase component Gpi16 subunit family protein (661 aa)
           
  0.851
101260924
Unknown protein; Has 50 Blast hits to 50 proteins in 18 species- Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 0 (source- NCBI BLink) (189 aa)
           
  0.851
104645911
Uncharacterized protein; Bromodomain transcription factor (280 aa)
           
  0.851
101263053
Splicing factor PWI domain-containing protein (921 aa)
       
 
  0.746
101266087
annotation not available (617 aa)
           
  0.650
101263593
annotation not available (534 aa)
           
  0.649
101250489
annotation not available (593 aa)
           
  0.649
Solyc10g074490.1.1
annotation not available (645 aa)
           
  0.649
101253235
annotation not available (542 aa)
           
  0.649
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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