STRINGSTRING
Solyc03g007980.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc03g007980.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc03g007980.1.1Uncharacterized protein (331 aa)    
Predicted Functional Partners:
FtsZ1
Plastid-dividing ring protein (419 aa)
     
 
  0.921
Solyc10g083490.1.1
Uncharacterized protein (480 aa)
     
 
  0.905
Solyc09g009430.2.1
Uncharacterized protein (478 aa)
     
 
  0.905
Solyc12g014560.1.1
Uncharacterized protein (467 aa)
     
 
  0.877
Solyc05g012710.2.1
Uncharacterized protein (234 aa)
     
 
  0.868
Solyc02g083140.2.1
Ribonuclease E (935 aa)
     
 
  0.864
Solyc00g286010.1.1
Annotation not available (122 aa)
       
 
  0.707
Solyc00g104200.1.1
Annotation not available (402 aa)
       
 
  0.707
Solyc01g007880.2.1
Uncharacterized protein (781 aa)
       
 
  0.625
Solyc00g026870.1.1
Annotation not available (465 aa)
         
  0.620
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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