• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
101265404 protein (Solanum lycopersicum) - STRING interaction network
"101265404" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101265404annotation not available (536 aa)    
Predicted Functional Partners:
101262195
Uncharacterized protein; Vps51/Vps67 family (components of vesicular transport) protein (1073 aa)
     
   
  0.561
101253027
Golgi transport complex protein-related (845 aa)
           
  0.560
101252014
Uncharacterized protein; CONTAINS InterPro DOMAIN/s- Conserved oligomeric complex COG6 (InterPro-IPR010490); Has 384 Blast hits to 379 proteins in 190 species- Archae - 0; Bacteria - 4; Metazoa - 151; Fungi - 156; Plants - 42; Viruses - 0; Other Eukaryotes - 31 (source- NCB /.../k) (691 aa)
           
  0.560
101254422
Conserved oligomeric Golgi complex component-related / COG complex component-related; Belongs to the COG8 family (576 aa)
           
  0.454
101250940
UDP-Glycosyltransferase superfamily protein (467 aa)
           
  0.437
101255293
Embryo yellow protein; Conserved oligomeric Golgi complex component-related / COG complex component-related (835 aa)
           
  0.435
101246944
Uncharacterized protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- protein transport, Golgi organization; LOCATED IN- vacuole; EXPRESSED IN- 23 plant structures; EXPRESSED DURING- 13 growth stages; CONTAINS InterPro DOMAIN/s- COG complex component, COG2 (InterP /.../009316); Has 30201 Blast hits to 17322 proteins in 780 species- Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source- NCBI BLink) (742 aa)
           
  0.422
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
Server load: low (9%) [HD]