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STRINGSTRING
TDR8 protein (Solanum lycopersicum) - STRING interaction network
"TDR8" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TDR8annotation not available (177 aa)    
Predicted Functional Partners:
BL1
Bell-like homeodomain protein 1 (400 aa)
       
 
  0.816
TKn3
Knotted 3 protein (320 aa)
       
 
  0.815
101244699
Uncharacterized protein; BEL1-like homeodomain 1 (700 aa)
       
 
  0.754
101266995
LOB domain-containing protein 4 (161 aa)
           
  0.539
exp11
Uncharacterized protein; Expansin11 (257 aa)
           
  0.487
LOC543847
Ovate protein (278 aa)
           
  0.418
Solyc08g066010.2.1
annotation not available (1529 aa)
       
 
  0.404
Solyc08g066000.1.1
annotation not available (423 aa)
       
 
  0.404
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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