Groups of genes that are frequently observed in each other's genomic neighborhood.
Known metabolic pathways, protein complexes, signal transduction pathways, etc ... from curated databases.
Genes that are sometimes fused into single open reading frames.
STRING allows inspection of the interaction evidence for any given network. Choose any of the viewers above (disabled if not applicable in your network).
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
colored nodes: query proteins and first shell of interactors
white nodes: second shell of interactors
empty nodes: proteins of unknown 3D structure
filled nodes: some 3D structure is known or predicted
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
from curated databases
annotation not available (313 aa)
Predicted Functional Partners:
Hydroxyproline-rich glycoprotein family protein (443 aa)
Uncharacterized protein; Translocon at the inner envelope membrane of chloroplasts 110 (1005 aa)
Uncharacterized protein; NAD(P)-binding Rossmann-fold superfamily protein (734 aa)
Uncharacterized protein; Translocon at the inner envelope membrane of chloroplasts 55-II (546 aa)
Tic22-like family protein (293 aa)
Eukaryotic translation initiation factor 3 subunit L; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation (517 aa)
annotation not available (115 aa)
annotation not available (350 aa)
Uncharacterized protein; Translocon at inner membrane of chloroplasts 21 (283 aa)
annotation not available (271 aa)
Your Current Organism:
NCBI taxonomy Id: 4081 Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato