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STRINGSTRING
Solyc03g025610.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc03g025610.1.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc03g025610.1.1annotation not available (418 aa)    
Predicted Functional Partners:
Solyc00g140060.2.1
annotation not available (219 aa)
 
          0.825
Solyc10g049850.1.1
annotation not available (312 aa)
       
      0.683
Solyc01g107420.2.1
annotation not available (104 aa)
       
      0.683
101252948
annotation not available (775 aa)
           
  0.612
LOC543838
Phosphatidylserine decarboxylase proenzyme 1, mitochondrial; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer). Plays a central role in phospholipid metabolism and in the interorganelle trafficking of phosphatidylserine; Belongs to the phosphatidylserine decarboxylase family. PSD-B subfamily. Eukaryotic type I sub-subfamily (445 aa)
     
   
  0.587
SBT2
SBT2 protein; Subtilisin-like protease (775 aa)
           
  0.571
Solyc03g025630.2.1
annotation not available (214 aa)
 
            0.570
101255034
Cellular apoptosis susceptibility protein, putative / importin-alpha re-exporter, putative (975 aa)
     
      0.567
101267007
Uncharacterized protein; N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein (350 aa)
           
  0.565
MSH2
Uncharacterized protein; Component of the post-replicative DNA mismatch repair system (MMR) (943 aa)
       
      0.556
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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