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STRINGSTRING
101249333 protein (Solanum lycopersicum) - STRING interaction network
"101249333" - SNARE-like superfamily protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101249333SNARE-like superfamily protein; Belongs to the synaptobrevin family (219 aa)    
Predicted Functional Partners:
101250531
Uncharacterized protein; Syntaxin of plants 32; Belongs to the syntaxin family (341 aa)
     
  0.985
Solyc07g054140.2.1
Uncharacterized protein; Syntaxin of plants 31; Belongs to the syntaxin family (318 aa)
     
  0.985
101256196
Membrin; Involved in transport of proteins from the cis/medial- Golgi to the trans-Golgi network (245 aa)
     
  0.982
101268613
Target SNARE coiled-coil domain protein (145 aa)
     
  0.972
101245764
BET1P/SFT1P-like protein 14A (117 aa)
     
  0.972
101249911
annotation not available (317 aa)
     
  0.956
101247988
annotation not available (280 aa)
     
  0.956
101250005
Uncharacterized protein; RINT-1 / TIP-1 family (790 aa)
     
 
  0.930
101259553
annotation not available (199 aa)
     
 
  0.925
101268430
Sec20 family protein (293 aa)
       
  0.917
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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