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101248748 protein (Solanum lycopersicum) - STRING interaction network
"101248748" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101248748Uncharacterized protein; Component of the post-replicative DNA mismatch repair system (MMR) (1117 aa)    
Predicted Functional Partners:
MSH2
Uncharacterized protein; Component of the post-replicative DNA mismatch repair system (MMR) (943 aa)
   
 
0.995
Solyc07g018340.2.1
annotation not available (320 aa)
     
 
  0.980
pcna
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (264 aa)
     
 
  0.969
MLH1
Uncharacterized protein; MLH1 (728 aa)
 
 
  0.955
Solyc02g082660.2.1
MUTL protein homolog 3 (1211 aa)
   
 
  0.954
Solyc09g090890.1.1
annotation not available (144 aa)
     
 
  0.952
FEN1
Flap endonuclease 1; Structure-specific nuclease with 5’-flap endonuclease and 5’-3’ exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5’-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5’-end of a downstream Okazaki fragment. It enters the flap from the 5’-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site-terminated flap. Acts as a [...] (382 aa)
   
 
  0.949
101256637
DNA binding;nucleotide binding;nucleic acid binding;DNA-directed DNA polymerases;DNA-directed DNA polymerases (1086 aa)
     
 
  0.947
Solyc02g071530.1.1
5’-3’ exonuclease family protein (742 aa)
   
 
  0.939
Solyc01g079520.2.1
Uncharacterized protein; Component of the post-replicative DNA mismatch repair system (MMR) (1312 aa)
   
 
0.935
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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