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STRINGSTRING
101264595 protein (Solanum lycopersicum) - STRING interaction network
"101264595" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101264595annotation not available (527 aa)    
Predicted Functional Partners:
Solyc03g026260.2.1
TraB family protein (412 aa)
           
  0.589
101244573
Uncharacterized protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biological_process unknown; LOCATED IN- mitochondrion; EXPRESSED IN- 26 plant structures; EXPRESSED DURING- 14 growth stages; CONTAINS InterPro DOMAIN/s- Mitochondrial inner membrane protein Mit /.../ (InterPro-IPR019133); Has 30201 Blast hits to 17322 proteins in 780 species- Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source- NCBI BLink); Belongs to the MICOS complex subunit Mic60 family (639 aa)
           
  0.567
Solyc01g073690.2.1
Uncharacterized protein; Mitochondrial ATP synthesis coupled proton transport protein (246 aa)
           
  0.565
101249114
Uncharacterized protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biological_process unknown; LOCATED IN- chloroplast; EXPRESSED IN- 13 plant structures; EXPRESSED DURING- 9 growth stages; BEST Arabidopsis thaliana protein match is- Pyridoxal phosphate (PLP)-d /.../nt transferases superfamily protein (TAIR-AT5G51920.1); Has 520 Blast hits to 468 proteins in 130 species- Archae - 5; Bacteria - 23; Metazoa - 99; Fungi - 131; Plants - 231; Viruses - 0; Other Eukaryotes - 31 (source- NCBI BLink) (613 aa)
           
  0.541
101250087
Uncharacterized protein; Pyridoxal phosphate (PLP)-dependent transferases superfamily protein (591 aa)
           
  0.541
Solyc04g010310.2.1
P-glycoprotein 20 (1285 aa)
     
   
  0.520
Solyc04g010300.2.1
annotation not available (119 aa)
     
   
  0.520
Solyc07g045420.2.1
Protein kinase superfamily protein (699 aa)
           
  0.519
101265507
annotation not available (723 aa)
           
  0.518
101266972
annotation not available (220 aa)
           
  0.518
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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