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Solyc03g026320.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc03g026320.2.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc03g026320.2.1annotation not available (169 aa)    
Predicted Functional Partners:
Solyc03g026330.2.1
Unknown protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biological_process unknown; LOCATED IN- chloroplast; EXPRESSED IN- 19 plant structures; EXPRESSED DURING- 13 growth stages; Has 60 Blast hits to 60 proteins in 24 species- Archa /.../ Bacteria - 14; Metazoa - 0; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes - 1 (source- NCBI BLink) (152 aa)
           
  0.701
SDH
Sorbitol related enzyme (355 aa)
     
   
  0.690
101246310
Non-intrinsic ABC protein 14 (274 aa)
           
  0.681
101267455
Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism (527 aa)
   
   
  0.674
Solyc07g062430.2.1
Uncharacterized protein; Phosphoesterase (343 aa)
   
   
  0.634
101249114
Uncharacterized protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biological_process unknown; LOCATED IN- chloroplast; EXPRESSED IN- 13 plant structures; EXPRESSED DURING- 9 growth stages; BEST Arabidopsis thaliana protein match is- Pyridoxal phosphate (PLP)-d /.../nt transferases superfamily protein (TAIR-AT5G51920.1); Has 520 Blast hits to 468 proteins in 130 species- Archae - 5; Bacteria - 23; Metazoa - 99; Fungi - 131; Plants - 231; Viruses - 0; Other Eukaryotes - 31 (source- NCBI BLink) (613 aa)
           
  0.618
101250087
Uncharacterized protein; Pyridoxal phosphate (PLP)-dependent transferases superfamily protein (591 aa)
           
  0.618
101254359
ABC transporter family protein (260 aa)
           
  0.582
101260717
Uncharacterized protein; Peroxisomal ABC transporter 1 (1344 aa)
       
 
  0.559
Solyc12g070270.1.1
annotation not available (502 aa)
     
   
  0.559
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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