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STRINGSTRING
101261301 protein (Solanum lycopersicum) - STRING interaction network
"101261301" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101261301annotation not available (431 aa)    
Predicted Functional Partners:
101249890
annotation not available (116 aa)
       
 
  0.883
101259644
annotation not available (118 aa)
       
 
  0.883
101258564
annotation not available (532 aa)
     
 
  0.821
101250286
Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation (106 aa)
           
  0.763
Solyc12g099030.1.1
Uncharacterized protein; Ubiquitin (190 aa)
       
 
  0.752
101248858
Uncharacterized protein; Ubiquitin (156 aa)
       
 
  0.752
UBI3
Ubiquitin-40S ribosomal protein S27a; Ubiquitin exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked- Lys-48-linked is involve [...] (156 aa)
       
 
  0.752
101250796
Uncharacterized protein; Nudix hydrolase homolog 25; Belongs to the Nudix hydrolase family (173 aa)
           
  0.739
101243954
annotation not available (155 aa)
       
 
  0.737
101244826
annotation not available (189 aa)
       
 
  0.737
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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