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Solyc03g031650.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc03g031650.2.1" - Autophagy-related protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc03g031650.2.1Autophagy-related protein (123 aa)    
Predicted Functional Partners:
Solyc11g068930.1.1
Uncharacterized protein (715 aa)
     
  0.994
Solyc09g065700.2.1
Uncharacterized protein (3587 aa)
     
 
  0.991
Solyc06g034160.2.1
Autophagy-related protein 3 (313 aa)
     
  0.977
Solyc01g006230.2.1
Uncharacterized protein (391 aa)
     
  0.974
Solyc06g071770.2.1
Uncharacterized protein (737 aa)
     
  0.966
Solyc03g112230.2.1
Uncharacterized protein (864 aa)
     
  0.966
Solyc12g099020.1.1
Uncharacterized protein (120 aa)
       
 
  0.902
Solyc12g099010.1.1
Uncharacterized protein (1468 aa)
       
 
  0.902
Solyc06g043140.2.1
Autophagy protein 5 ; Required for autophagy (340 aa)
       
  0.900
Solyc02g036380.2.1
Autophagy protein 5 ; Required for autophagy (418 aa)
       
  0.900
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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