STRINGSTRING
Solyc03g031820.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc03g031820.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc03g031820.2.1Uncharacterized protein (645 aa)    
Predicted Functional Partners:
Solyc09g009340.1.1
Uncharacterized protein (731 aa)
     
 
  0.943
Solyc07g049720.2.1
Uncharacterized protein (881 aa)
       
 
  0.938
Solyc04g016530.2.1
DNA-(apurinic or apyrimidinic site) lyase (539 aa)
     
 
  0.934
Solyc03g111600.2.1
DNA-(apurinic or apyrimidinic site) lyase (377 aa)
     
 
  0.934
Solyc03g033530.2.1
Uncharacterized protein (591 aa)
     
 
  0.934
Solyc09g005100.2.1
Uncharacterized protein (746 aa)
     
 
  0.760
Solyc07g062430.2.1
Uncharacterized protein (343 aa)
     
 
  0.731
Solyc05g006120.2.1
Uncharacterized protein (536 aa)
       
 
  0.648
Solyc01g068350.2.1
Uncharacterized protein (214 aa)
     
 
  0.615
Solyc01g068340.2.1
Uncharacterized protein (515 aa)
     
 
  0.615
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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