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ARF8-1 protein (Solanum lycopersicum) - STRING interaction network
"ARF8-1" - Auxin response factor in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARF8-1Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5’-TGTCTC-3’ found in the auxin-responsive promoter elements (AuxREs) (844 aa)    
Predicted Functional Partners:
101248972
annotation not available (272 aa)
       
 
  0.801
101257162
Uncharacterized protein; BIG PETAL P (227 aa)
       
 
  0.801
Solyc03g113560.2.1
annotation not available (102 aa)
       
 
  0.801
ctd1
Auxin-responsive protein; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations (349 aa)
       
 
  0.752
101256245
Squamosa promoter binding-like protein (136 aa)
           
  0.716
Solyc07g043330.1.1
Uncharacterized protein; GRAS family transcription factor; Belongs to the GRAS family (432 aa)
       
 
  0.713
Solyc11g013470.1.1
annotation not available (339 aa)
           
  0.687
AGO1-1
Argonaute1-1; Argonaute 1 ; Belongs to the argonaute family (1054 aa)
           
  0.682
101244695
Uncharacterized protein; GRAS family transcription factor; Belongs to the GRAS family (679 aa)
       
 
  0.635
101262675
Uncharacterized protein; GRAS family transcription factor; Belongs to the GRAS family (507 aa)
       
 
  0.631
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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