STRINGSTRING
Solyc03g032010.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc03g032010.2.1" - 3-hydroxy-3-methylglutaryl coenzyme A reductase in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc03g032010.2.13-hydroxy-3-methylglutaryl coenzyme A reductase (503 aa)    
Predicted Functional Partners:
Solyc12g056450.1.1
Uncharacterized protein (462 aa)
   
 
  0.979
Solyc08g080170.2.1
Uncharacterized protein (462 aa)
   
 
  0.979
HMGS
3-hydroxy-3-methylglutaryl coenzyme A synthase (462 aa)
   
 
  0.979
Solyc01g098840.2.1
Uncharacterized protein (392 aa)
       
  0.970
Solyc08g080160.2.1
Uncharacterized protein (81 aa)
   
 
  0.806
IPI
Isopentenyl diphosphate isomerase (235 aa)
   
   
  0.622
IPI2
Plastid isopentenyl diphosphate isomerase (294 aa)
   
   
  0.622
FPS1
Farnesyl pyrophosphate synthase (342 aa)
   
 
  0.583
Solyc10g005840.2.1
Uncharacterized protein (248 aa)
   
 
  0.583
Solyc10g005820.1.1
Uncharacterized protein (119 aa)
   
 
  0.583
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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