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STRINGSTRING
101262595 protein (Solanum lycopersicum) - STRING interaction network
"101262595" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101262595annotation not available (469 aa)    
Predicted Functional Partners:
cdc5
CDC5-like protein (987 aa)
     
 
  0.987
101264735
annotation not available (455 aa)
   
 
0.984
101256745
annotation not available (455 aa)
   
 
0.984
101260036
Uncharacterized protein; INO80 ortholog (1539 aa)
     
 
  0.982
101248581
Uncharacterized protein; CONTAINS InterPro DOMAIN/s- YL1 nuclear, C-terminal (InterPro-IPR013272); Has 279 Blast hits to 279 proteins in 147 species- Archae - 0; Bacteria - 0; Metazoa - 94; Fungi - 133; Plants - 35; Viruses - 0; Other Eukaryotes - 17 (source- NCBI BLink) (124 aa)
       
 
  0.978
101260909
Actin-related protein 4; Belongs to the actin family (435 aa)
     
 
  0.975
101260649
Actin-related protein 5; Belongs to the actin family (716 aa)
     
 
  0.974
Solyc01g079210.2.1
Myb-like transcription factor family protein (451 aa)
     
 
  0.970
101250936
Uncharacterized protein; Tetratricopeptide repeat (TPR)-like superfamily protein (470 aa)
     
 
  0.966
101250882
Uncharacterized protein; Sequence-specific DNA binding transcription factors;DNA binding;DNA binding (360 aa)
     
 
  0.965
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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