STRINGSTRING
Solyc03g032070.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc03g032070.2.1" - RuvB-like helicase in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc03g032070.2.1RuvB-like helicase (469 aa)    
Predicted Functional Partners:
Solyc11g069370.1.1
RuvB-like helicase (455 aa)
   
0.990
Solyc06g062350.2.1
RuvB-like helicase (455 aa)
   
0.990
Solyc01g079210.2.1
Uncharacterized protein (451 aa)
     
  0.985
Solyc12g037980.1.1
Uncharacterized protein (435 aa)
     
  0.973
Solyc04g009830.2.1
Uncharacterized protein (360 aa)
     
  0.968
Solyc04g016370.2.1
Uncharacterized protein (1539 aa)
     
  0.961
Solyc04g074800.2.1
Uncharacterized protein (255 aa)
     
 
  0.957
Solyc12g017280.1.1
Uncharacterized protein (1394 aa)
       
 
  0.949
Solyc09g089660.2.1
Uncharacterized protein (539 aa)
     
  0.934
Solyc06g043170.2.1
Uncharacterized protein (716 aa)
     
  0.934
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
Server load: low (8%) [HD]