STRINGSTRING
Solyc03g033430.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc03g033430.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc03g033430.1.1Uncharacterized protein (170 aa)    
Predicted Functional Partners:
Solyc06g083620.2.1
Uncharacterized protein (444 aa)
     
  0.997
Solyc12g044740.1.1
Uncharacterized protein (483 aa)
     
  0.996
Solyc08g082700.2.1
Uncharacterized protein (267 aa)
     
  0.996
Solyc07g009140.2.1
Uncharacterized protein (386 aa)
     
  0.996
Solyc07g016200.2.1
Proteasome subunit beta type ; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity (236 aa)
     
  0.995
Solyc07g042780.1.1
Uncharacterized protein (49 aa)
     
  0.994
Solyc07g042770.1.1
Uncharacterized protein (74 aa)
     
  0.994
Solyc06g082660.2.1
Uncharacterized protein (414 aa)
     
  0.994
Solyc06g082630.2.1
Uncharacterized protein (414 aa)
     
  0.994
Solyc09g090720.2.1
Uncharacterized protein (386 aa)
     
  0.994
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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