STRINGSTRING
Solyc03g033990.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc03g033990.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc03g033990.1.1Uncharacterized protein (281 aa)    
Predicted Functional Partners:
Solyc12g035840.1.1
Uncharacterized protein (262 aa)
 
  0.957
Solyc11g063630.1.1
Uncharacterized protein (272 aa)
 
 
  0.952
Solyc00g049210.1.1
Annotation not available (589 aa)
 
 
  0.950
Solyc11g021210.1.1
YCF5 (290 aa)
   
  0.918
Solyc08g022180.1.1
Uncharacterized protein (195 aa)
   
  0.918
Solyc01g017340.1.1
Uncharacterized protein (232 aa)
   
  0.918
Solyc03g013380.1.1
Uncharacterized protein (74 aa)
   
 
  0.904
Solyc12g010220.1.1
Uncharacterized protein (229 aa)
 
 
  0.780
Solyc03g120610.2.1
Uncharacterized protein (158 aa)
 
   
  0.776
Solyc10g080080.1.1
Thioredoxin reductase (543 aa)
   
   
  0.685
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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