• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
101265208 protein (Solanum lycopersicum) - STRING interaction network
"101265208" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101265208annotation not available (150 aa)    
Predicted Functional Partners:
Solyc11g006580.1.1
Uncharacterized protein; Nudix hydrolase homolog 26; Belongs to the Nudix hydrolase family (227 aa)
         
  0.851
101256314
Uncharacterized protein; Nudix hydrolase homolog 14 (307 aa)
         
  0.789
101250796
Uncharacterized protein; Nudix hydrolase homolog 25; Belongs to the Nudix hydrolase family (173 aa)
         
  0.787
101263980
Uncharacterized protein; Nudix hydrolase homolog 23 (281 aa)
         
  0.787
101259608
Uncharacterized protein; Nudix hydrolase homolog 9 (313 aa)
           
  0.763
101253517
Uncharacterized protein; Nudix hydrolase homolog 3 (783 aa)
         
  0.725
Solyc10g008770.2.1
annotation not available (275 aa)
         
  0.685
101262901
annotation not available (192 aa)
         
  0.684
Solyc06g075080.2.1
Uncharacterized protein; Nudix hydrolase homolog 19 (458 aa)
         
  0.652
101254843
annotation not available (234 aa)
         
  0.643
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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